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BIO533 FHL Summer 2012 B Term
Ecology of Infectious Marine Disease





Instructors:
 
Dr. Carolyn Friedman
    Email: carolynf@uw.edu
    Phone: 707-328-8388
 
Dr. Steven Roberts
Phone: 206-866-5141
t: @sr320
 
Dr. Drew Harvell
Phone: 607-275-1661

TA: Lisa Crosson
    Email: lisa418@uw.edu
Phone: 206-708-9241

Meeting Times and Locations

Lecture: M-F 8:30-9:30am Computer Room & 1:30-2:30pm Commons
Sat 9-10am only

Laboratory: M-F 9:40am-12:15pm & 2:40-5pm Lab 5
Sat 10am-12pm only

Discussion Board

Platform for all communications including questions, comments, and information sharing

Course Goal
Teach students fundamental anatomy and diagnostic methods (Week 1), aspects of field ecology (Week 2), laboratory experimental procedures (Week 3), and the integration of genomic approaches to better understand host and pathogen dynamics (Week4). Students will also be provided opportunities in critical independent thinking (Project) and science communication and outreach (Blog).

Overview and Logistics
Week 1 Lecture Theme - Organism / Technique Basics
Week 1 Lab Module - Armina Pathogen PCR
Week 2 Lecture Theme - Disease Ecology / Labyrinthulids
Week 2 Lab Module - Sea Grass Labyrinthulid
Week 3 Lecture Theme - Ocean Acidification / Host Physiology
Week 3 Lab Module - Oysters and Vibrio tubiashii
Week 4 Lecture Theme - Genomic Applications
Week 4 Lab Module - Online Resources and HTS data analysis

Students will participate in all 4 lab modules, then select at least one lab module activity and work in small groups to build upon and expand research efforts. These projects will be presented during Week 5 and corresponding research paper submitted.


Grading - 4.0 Scale
Exam  -  25%

Blog Posts and Lab Notebook  -  25%
Contributions to course blog and lab notebooks are expected on a daily basis. Each week students will post a "week in review" video to the blog.

Participation  -  25%  

Projects - 25%   Presentations & Papers (group)

Course Detailed Description

Infectious diseases of marine organisms are on the increase, and yet processes governing host infectivity and pathogen virulence are poorly known, especially for non-commercial marine invertebrates. Indeed, one of the emerging frontiers in ocean research is invertebrate-microbial interactions. Despite these knowledge gaps, the prediction is that diseases will increase in warming oceans and become an ever-present component of near-shore ecological interactions. This course will be a training program in invertebrate-pathogen ecology that will bring together and train the future leaders in this rapidly emerging, multidisciplinary field. The course will 1) survey host-pathogen interaction in the Friday Harbor region, 2) teach diagnostic tools for identifying viral, bacterial, protozoan and fungal infections of invertebrates, 3) teach approaches to examine the invertebrate innate immune response to different pathogens, and finally 4) use these methods to address ecological questions about the distribution of pathogenic interactions, and the experimental effects of temperature and increased acidification on interactions. 

A primary goal of the program is to provide advanced undergraduates, graduate students, and postdoctoral investigators with a broad understanding of host-pathogen interactions as well as the techniques used to study the ecology of marine animals in situ. By bringing together top researchers in host-pathogen interactions, we provide students with a unique opportunity to work side by side with world experts using state-of-the-art tools and technologies. The program also provides a setting for developing and testing new technologies and methods. We also hope it will serve as a research magnet, attracting leading scientists to conduct their own research in a creative teaching and learning environment that catalyzes interactions across the various disciplines associated with Marine Disease Ecology.

In a broader sense, this project will add to our limited understanding of how climate change affects the ecological health of temperate coastal communities. It will also help to address basic information gaps concerning direct biological effects of climate change on susceptible species and the dynamics of parasitism and symbiosis. This understanding is critical to developing realistic management schemes for mitigating impacts of climate change.

 

Blog Spot!

A blog documenting experiences, activities, and discoveries of The Ecology of Infectious Marine Disease course at Friday Harbor Laboratories

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Send questions about this workspace to Steven Roberts.